It's worth noting that once you take a position in a pair-trade the subsequent change in the ratio does not always equate to the same change in your P&L. It depends on whether you are winning/losing on the long position or the short position. Specifically, while the ratio will change commensurately with a change in your long position, it will not change commensurately for changes in your short position. For winning short positions the change in the ratio overstates the winnings, and for losing short positions the change in the ratio understates the losses. As such, you can't set your take-profit and stop-loss levels at percent changes in the ratio. Example follows:
Long StockA @ 100
Short StockB @ 100
Ratio = 1
Long StockA now 120
Short StockB now 100
Ratio = 1.2
We can see that a 20% increase in the long stock equates to a 20% increase in the ratio. Great.
Long StockA @ 100
Short StockB @ 100
Ratio = 1
Long StockA now 100
Short StockB now 80
Ratio = 1.25
We can see that a 20% fall in the short stock equates to a 25% increase in the ratio. Ratio has overstated the win.
Long StockA @ 100
Short StockB @ 100
Ratio = 1
Long StockA now 100
Short StockB now 120
Ratio = 0.83
We can see that a 20% increase in the short stock equates to a 16.6% decrease in the ratio. Ratio has understated the loss.